Glyma14g11151 - SoyBase

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Report for Sequence Feature Glyma14g11151

Feature Type:	gene_model
Chromosome:	Gm14
Start:	9466723
stop:	9474079
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma14g11151

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G26310	AT	Annotation by Michelle Graham. TAIR10: Chalcone-flavanone isomerase family protein \| chr2:11201770-11203919 FORWARD LENGTH=398	SoyBase	E_val: 2.00E-111	ISS
GO:0042398	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular modified amino acid biosynthetic process	SoyBase	N/A	ISS
GO:0009570	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma	SoyBase	N/A	ISS
GO:0005504	GO-mf	Annotation by Michelle Graham. GO Molecular Function: fatty acid binding	SoyBase	N/A	ISS
PF02431	PFAM	Chalcone-flavanone isomerase	JGI		ISS
UniRef100_I3SC89	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Medicago truncatula RepID=I3SC89_MEDTR	SoyBase	E_val: 1.00E-179	ISS
UniRef100_Q58G09	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Chalcone-flavanone isomerase-like protein n=2 Tax=Arabidopsis thaliana RepID=Q58G09_ARATH	SoyBase	E_val: 9.00E-109	ISS

Expression Patterns of Glyma14g11151

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma14g11151 not represented in the dataset	Glyma14g11151 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma14g11151

Paralog	Evidence	Comments
Glyma17g34435	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma14g11151 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g098100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma14g11151

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma14g11151

Limit To All Plant Sequences

>Glyma14g11151.2   sequence type=transcript   gene model=Glyma14g11151   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATCCTCTTTGACCCATTCCCTGTCCAAAGCTTATTCCCCCTCTTCTTTAATTCCCTTTCTCTCATAACAAAAACATCGCCAATATTCACGTCGCGATTCGCGAAAACCGAAAAGCTTAATCGCTTCTCATTCAATTCCCGGATCCAAACAGAACCCATTATTTTCCTTTCCGTTTTCTCATTTTCTCATTCTCCTTTCAATTTCAGCGATCGATCGCGTGCGTGCGTCCGTCGCGATGAACAACGATTTCCTTTGGCTTCCATCGCTATACTCGGATCCGGAAGTGTTCACGTATTTAGAACCCTTCGTGTTCCGCAGCTCTTCTCTGAGCTCGCATTTTCTGCATTCGCTGGCGACAAATTCCCGAAGCTTCGCGCTCGAGGAGGCGTTCGGACATGTGTCGCGGTTCTCCGGCGCGTTGCTGTTCTGGCTCTCGCGCGCGTCGAGCTCCAATGTGGCGCGTTCCTTGCGCGGTTCGCCGCCGCTCCGGTTCGGTAGCGTGCAGGTTAAGGCTGGGTCGACGACGAATGTGCGCGTGTTCGGGTTTCCGTTCGGATCGAAGTGGAAATCGTCGTTTTCGAGTGTGAGGTTGGGGAAGATTTCGAGTTTGGCGATGAGGATGATTTGGAGAGAAGCGAAGAGGCTTAGCTTGTTCCCCGTTCTGTCGCTGGCTGTTGCGTTGGTTCCACCGTTTCAAAACTTGTCATCAAATGTACTAGCTAGCCCGTTGCTCAATCCTGATGTGCAAATTTTTGGAGCCATGGACCAAGTGCCTAAGGAAGTTGAATGCCAAGGATGTTCGTTTCTACCGTGTCTTGAGTTGAGCCAGGCAAAACCTGCAGTGGAGCCTAAAACTGGTATTGAATTTCCTTTGGTTCTAGACAATCTATTCACTGGAGAGAAGAATTACAACTTAAACTCTGAGGTCCTGGTTGGAACAGGATCCAGAACCATGACAATTGTTAAAATCAAGTCACTGAAGGTCTATGCTTTTGGAGTTTATGTTCATCCATATTCCCTCTGTGAGAAATTGGGGCCAAAATATGCATCAATTTCTGCTGATGAATTGAATAACCATCATGACTTCTACAAGGATCTTCTCAGGGAGGATATCAATATGACTGTTAGACTTGTTGCAAATTGCAGGGGTATGAAAATTAACAGCGTGAAAGATGCTTTTGAAAAATCACTTCGAGCTCGATTAGTAAAGGCAAATCCATCCACAGACTTTAGTTGCCTAAAGACATTTGGTTCATACTTCACAGAGAATATCTCAATTCCTTTGGGAACAGTAATTGAGTTCAAACGAACAGTTGATGGACGTCTGATCACTAAAATTAGTGGGAATCAGATAGGAAGTGTTCACAGCAAAGATTTGTGTCGGGCTTTCTTTGACATGTACATTGGAGATGTCCCTGTGTGTGAACAAACTAAAAAGGAGATTGGCATGAATGCTGCAAATATTATTAACAAGTGCTAAAACGATTCATTTTGTATCCACTTGTCCTACTTTTAGAATGGACAATTGGACATGGGTAGCATGGCAAATTGGCGTATACCCTTAACTTATAGAAGCAGTGGTTTCTTGAAATTGATTTCAACCTGCTTTAAAAATCATTTGCAGGCATTACTTCTCAAGGTTTGTCCTTTGAATCATAGAAGTCTTTAGGATAGCTTAAATTGGATTTTCATTGGAAAGTTCTCTGTTCCTATTGATTATATCATTTCATCGCCTTGATGCCCCTATCCCTTTTGTTAGATGTATACTGTTTTAGAGAATGAAAAGGAAAAAAATGCAGATAAGAATGTTTGTGCCCGTTTGCTCAAGCAAATAAGTATTTGCTACCTTTATATTCAGTGTAGTAATGCGTTTAACTAGCATTTCCCGTTGATACGATCGGGAAATGCTATACAAAGCAGGGATTAGATTTTATTGACTTGGCAGCATTTCTTGTTGGAGAATGTATGAAACTTTAAGCGTGTGTTTGGAGTGGCGTTTTTAATGCACACAAGTTCCAATTTGCACGTCAAAATTGTATAAGCCGCAAAAGTTAAAGAGAGAAGCTTTGAACTGAACACGGATCAGATTGTGGCTGACGCGTAACTGTAGTGGACACATAACTAAACGCATGGTAGATGTGTTGTCCTTCCAAAAAATGTGAGTTTATTGAATTTAAATGTGACTGGTGTGATCCTTATGTTGTATGTATAATTTGTCTTTTTATGTTTGTTGCATGGTAACCGATTCTTTTCTCTGCTTCCTAAACTTGTAGGTCGCTAAGTTGTGTAGGTTGCCAAAAATGGATTCATGGTCCCCCAATGTATGTGTCTTGCATGTGCAATGTAATTAAGATTTTTTTAATTAGTTATATACAGTTACTATGTACAGAGGTGATTAGTCATTGTTTAAAACTCTTAGTAACTCCTTTGCAAATGGTAACTATTCACATACATCACGGAGGTAACTTTGTTAAAGGAAAACATGGTAAACTTGCCGATGAATGGAGCCGAGTAGATGTATTGCCTGGATATGATAATGATATGCTTGATGTTTTTAGTACATTAATGATCTTTAATATCCTTATGTATCAAATTTTTATGTTAACTGCTAAAAGTAGATGCAGACCTTATTAAGATGGTGAATGTTTCTACTAAGAACTATGACTCATAAGGGGTACATTCATGTTTATTACAAGCATCCTATTTATAAACCATAAGAGGCACAACGTGTTGAAGACATTGTAAAAGGGAATAAATTAAATATAGATAGACTGGATTTAATTGATGATAAGGAACTAAATTACTTACTTTTATACTTAAATATAAGCAAAAAGAAGTTATCTTGTAGGTGAGTTTGTTTAAATTTTCAAAAAATAACTTTACAATAAACATTATATATATATATATATATATTAAAAAGCAGATAGGATTTGTTTCTTAAAATATGTAGAAAATTATTTTTTTAAGTAGAAGTAATTTAGACAAATACTAAAAAAATAGAAAATTGTTTATTTTA

Coding sequences of Glyma14g11151

Limit To All Plant Sequences

>Glyma14g11151.1   sequence type=CDS   gene model=Glyma14g11151   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACAACGATTTCCTTTGGCTTCCATCGCTATACTCGGATCCGGAAGTGTTCACGTATTTAGAACCCTTCGTGTTCCGCAGCTCTTCTCTGAGCTCGCATTTTCTGCATTCGCTGGCGACAAATTCCCGAAGCTTCGCGCTCGAGGAGGCGTTCGGACATGTGTCGCGGTTCTCCGGCGCGTTGCTGTTCTGGCTCTCGCGCGCGTCGAGCTCCAATGTGGCGCGTTCCTTGCGCGGTTCGCCGCCGCTCCGGTTCGGTAGCGTGCAGGTTAAGGCTGGGTCGACGACGAATGTGCGCGTGTTCGGGTTTCCGTTCGGATCGAAGTGGAAATCGTCGTTTTCGAGTGTGAGGTTGGGGAAGATTTCGAGTTTGGCGATGAGGATGATTTGGAGAGAAGCGAAGAGGCTTAGCTTGTTCCCCGTTCTGTCGCTGGCTGTTGCGTTGGTTCCACCGTTTCAAAACTTGTCATCAAATGTACTAGCTAGCCCGTTGCTCAATCCTGATGTGCAAATTTTTGGAGCCATGGACCAAGTGCCTAAGGAAGTTGAATGCCAAGGATGTTCGTTTCTACCGTGTCTTGAGTTGAGCCAGGCAAAACCTGCAGTGGAGCCTAAAACTGGTATTGAATTTCCTTTGGTTCTAGACAATCTATTCACTGGAGAGAAGAATTACAACTTAAACTCTGAGGTCCTGGTTGGAACAGGATCCAGAACCATGACAATTGTTAAAATCAAGTCACTGAAGGTCTATGCTTTTGGAGTTTATGTTCATCCATATTCCCTCTGTGAGAAATTGGGGCCAAAATATGCATCAATTTCTGCTGATGAATTGAATAACCATCATGACTTCTACAAGGATCTTCTCAGGGAGGATATCAATATGACTGTTAGACTTGTTGCAAATTGCAGGGGTATGAAAATTAACAGCGTGAAAGATGCTTTTGAAAAATCACTTCGAGCTCGATTAGTAAAGGCAAATCCATCCACAGACTTTAGTTGCCTAAAGACATTTGGTTCATACTTCACAGAGAATATCTCAATTCCTTTGGGAACAGTAATTGAGTTCAAACGAACAGTTGATGGACGTCTGATCACTAAAATTAGTGGGAATCAGATAGGAAGTGTTCACAGCAAAGATTTGTGTCGGGCTTTCTTTGACATGTACATTGGAGATGTCCCTGTGTGTGAACAAACTAAAAAGGAGATTGGCATGAATGCTGCAAATATTATTAACAAGTGCTAA

>Glyma14g11151.2   sequence type=CDS   gene model=Glyma14g11151   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACAACGATTTCCTTTGGCTTCCATCGCTATACTCGGATCCGGAAGTGTTCACGTATTTAGAACCCTTCGTGTTCCGCAGCTCTTCTCTGAGCTCGCATTTTCTGCATTCGCTGGCGACAAATTCCCGAAGCTTCGCGCTCGAGGAGGCGTTCGGACATGTGTCGCGGTTCTCCGGCGCGTTGCTGTTCTGGCTCTCGCGCGCGTCGAGCTCCAATGTGGCGCGTTCCTTGCGCGGTTCGCCGCCGCTCCGGTTCGGTAGCGTGCAGGTTAAGGCTGGGTCGACGACGAATGTGCGCGTGTTCGGGTTTCCGTTCGGATCGAAGTGGAAATCGTCGTTTTCGAGTGTGAGGTTGGGGAAGATTTCGAGTTTGGCGATGAGGATGATTTGGAGAGAAGCGAAGAGGCTTAGCTTGTTCCCCGTTCTGTCGCTGGCTGTTGCGTTGGTTCCACCGTTTCAAAACTTGTCATCAAATGTACTAGCTAGCCCGTTGCTCAATCCTGATGTGCAAATTTTTGGAGCCATGGACCAAGTGCCTAAGGAAGTTGAATGCCAAGGATGTTCGTTTCTACCGTGTCTTGAGTTGAGCCAGGCAAAACCTGCAGTGGAGCCTAAAACTGGTATTGAATTTCCTTTGGTTCTAGACAATCTATTCACTGGAGAGAAGAATTACAACTTAAACTCTGAGGTCCTGGTTGGAACAGGATCCAGAACCATGACAATTGTTAAAATCAAGTCACTGAAGGTCTATGCTTTTGGAGTTTATGTTCATCCATATTCCCTCTGTGAGAAATTGGGGCCAAAATATGCATCAATTTCTGCTGATGAATTGAATAACCATCATGACTTCTACAAGGATCTTCTCAGGGAGGATATCAATATGACTGTTAGACTTGTTGCAAATTGCAGGGGTATGAAAATTAACAGCGTGAAAGATGCTTTTGAAAAATCACTTCGAGCTCGATTAGTAAAGGCAAATCCATCCACAGACTTTAGTTGCCTAAAGACATTTGGTTCATACTTCACAGAGAATATCTCAATTCCTTTGGGAACAGTAATTGAGTTCAAACGAACAGTTGATGGACGTCTGATCACTAAAATTAGTGGGAATCAGATAGGAAGTGTTCACAGCAAAGATTTGTGTCGGGCTTTCTTTGACATGTACATTGGAGATGTCCCTGTGTGTGAACAAACTAAAAAGGAGATTGGCATGAATGCTGCAAATATTATTAACAAGTGCTAA

Predicted protein sequences of Glyma14g11151

Limit To All Plant Sequences

>Glyma14g11151.1   sequence type=predicted peptide   gene model=Glyma14g11151   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNNDFLWLPSLYSDPEVFTYLEPFVFRSSSLSSHFLHSLATNSRSFALEEAFGHVSRFSGALLFWLSRASSSNVARSLRGSPPLRFGSVQVKAGSTTNVRVFGFPFGSKWKSSFSSVRLGKISSLAMRMIWREAKRLSLFPVLSLAVALVPPFQNLSSNVLASPLLNPDVQIFGAMDQVPKEVECQGCSFLPCLELSQAKPAVEPKTGIEFPLVLDNLFTGEKNYNLNSEVLVGTGSRTMTIVKIKSLKVYAFGVYVHPYSLCEKLGPKYASISADELNNHHDFYKDLLREDINMTVRLVANCRGMKINSVKDAFEKSLRARLVKANPSTDFSCLKTFGSYFTENISIPLGTVIEFKRTVDGRLITKISGNQIGSVHSKDLCRAFFDMYIGDVPVCEQTKKEIGMNAANIINKC*

>Glyma14g11151.2   sequence type=predicted peptide   gene model=Glyma14g11151   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNNDFLWLPSLYSDPEVFTYLEPFVFRSSSLSSHFLHSLATNSRSFALEEAFGHVSRFSGALLFWLSRASSSNVARSLRGSPPLRFGSVQVKAGSTTNVRVFGFPFGSKWKSSFSSVRLGKISSLAMRMIWREAKRLSLFPVLSLAVALVPPFQNLSSNVLASPLLNPDVQIFGAMDQVPKEVECQGCSFLPCLELSQAKPAVEPKTGIEFPLVLDNLFTGEKNYNLNSEVLVGTGSRTMTIVKIKSLKVYAFGVYVHPYSLCEKLGPKYASISADELNNHHDFYKDLLREDINMTVRLVANCRGMKINSVKDAFEKSLRARLVKANPSTDFSCLKTFGSYFTENISIPLGTVIEFKRTVDGRLITKISGNQIGSVHSKDLCRAFFDMYIGDVPVCEQTKKEIGMNAANIINKC*

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